Yuliya V. Karpievitch

Research Scientist (Postdoc)
Department of Statistics
Texas A&M University
525 Blocker Building, Ireland Street, College Station, TX 77840
Funded by the National Cancer Institute Bioinformatics Training Grant
I attended graduate school at the Medical University of South Carolina (MUSC) where I was funded by the National Library of Medicine Training Grant . I spent my last 1.5 years of gradute work at the M. D. Anderson Cancer Center in Houston TX.

Publications:
Karpievitch YV, Polpitiya AD, Anderson GA, Smith RD, Dabney AR. Liquid Chromatography Mass Spectrometry-Based Proteomics: Biological and Technical Aspects. Submitted.

Karpievitch YV, Hill EG, Leclerc AP, Dabney AR, Almeida JS (2009) An introspective comparison of random forest-based classifiers for the analysis of cluster-correlated data by way of RF++. PLoS One, 4(9):e7087.

Karpievitch YV, Taverner T, Adkins JN, Callister SJ, Anderson GA, Smith RD, Dabney AR (2009) Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition. Bioiformatics 2009, 25(19):2573-80. Epub 2009 Jul 14. [DAnTE]

Karpievitch YV, Stanley J, Taverner T, Huang J, Adkins J, Ansong C, Hefron F, Metz TO, Quan W-J, Yoon H, Smith RD, Dabney AR. A Statistical Framework for Protein Quantitation in Bottom-Up MS-Based Proteomics. Bioinformatics 2009, 25(16):2028-34. [DAnTE]

Karpievitch YV, Hill EG, Smolka AJ, Morris JS, Coombes KR, Baggerly KA, Almeida JS. PrepMS: TOF MS data graphical preprocessing tool. Bioinformatics. 2007 Jan 15;23(2):264-5. Epub 2006 Nov 22.

Karpievitch YV, Almeida JS. mGrid: a load-balanced distributed computing environment for the remote execution of the user-defined Matlab code. BMC Bioinformatics. 2006 Mar 15;7:139.

My CV [PDF]
PrepMS: Mass Spectrometry Graphical Preprocessing Tool
Towers of Hanoi execution time in C++ vs. Matlab. What a difference! Here is how is works
Courses I taught at the Computer Science Department, College of Charleston

Contact Information
e-mail:yuliya AT stat DOT tamu DOT edu