Journal publications:

Year 2006

• Ray, S. and Mallick, B.K (2006)  Functional clustering by Bayesian wavelet methods.  Journal of the Royal Statistical Society, B, 68, 305-332.
• Baladandayuthapani, V., Mallick, B., Hong, M., Lupton, J., Turner, N. and Carroll, R (2006) Bayesian hierarchical spatially correlated functional data analysis with application to colon carcinogenesis. (Submitted)
• Linag, F. and Wang, N. (2006) Dynamic hierarchical clustering of Gene expression Profiles. (Submitted)
• Liang, F. (2006), Use of Probit transformation in clustering gene expression profiles. (Submitted)
• Baladandayuthapani, V., Holmes, C., Mallick, B. and Carroll, R. (2006),  Modeling nonlinear gene interactions using Bayesian MARS. In Do, Mueller, Vannucci (eds.) Bayesian inference for gene expression and proteomics, Cambridge University Press.
• Sima, C. and Dougherty, E. R. (2006) Optimal Convex Error Estimators for Classification.  Pattern Recognition (To appear).

Year 2005

• Mallick, B.K., Ghosh, D. and Ghosh, M. (2005)  Bayesian classification of tumors using gene expression data. Journal of the Royal Statistical Society, B, 67, 219-234.
• Bae K, Mallick, B. and Elsik, C. (2005) Prediction of Protein inter-domain linker regions by a hidden Marko models. Bioinformatics, 21, 2264-2270.
• Sima, C., Braga-Neto, U., and Dougherty, E. R. (2005) Superior Feature-Set Ranking For Small Samples Using Bolstered Error Estimation. Bioinformatics, Vol. 21, No. 7, 1046-1054.
• Baladandayuthapani, V., Ray, S. and Mallick, B. (2005) Bayesian methods for DNA microarray data analysis. In Rao, C.R. and Dey, D.K. (eds.), Handbook in Statistics: Bayesian Statistics, Elseveiver: Amsterdam.
• Fu, W.,Dougherty, E.R.,Mallick, B. and Carroll, R. (2005)  How many samples are needed to build a classifier-A general sequential approach. Bioinformatics, 21, 63-70.
• Sima, C., Attoor, S., Braga-Neto, U., Lowey, J., Suh, E., and E. R. Dougherty (2005) Impact of Error Estimation on Feature-Selection Algorithms. Pattern Recognition. Vol. 38, No. 12, 2472-2482.
• Liang, F., Liu,C. and Wang,N. (2005) A sequential Bayesian procedure for differential gene expression.  Statistical Sinica (To appear).
•  Sima, C., Attoor, S., Braga-Neto, U., Lowey, J., Suh, E., and E. R. Dougherty (2005) Error Estimation Confounds Feature Selection in Expression-based Classification. In Proc. IEEE International Workshop on Genomic Signal Processing and Statistics, Newport, Rhode Island.
• Dougherty, E. R., Datta, A., and Sima, C. (2005)  Research Issues in Genomic Signal Processing. IEEE Signal Processing Magazine, 46-68, Vol. 22 No. 6, November, 2005.

 Year 2004 

• Lee, K.E and Mallick, B. (2004) Bayesian methods for gene selection in the survival model with application to DNA microarray data. Sankhya, 66, 756-778.
•  Bae, K. and Mallick, B. (2004) Gene selection using a two-level hierarchical Bayesian model. Bioinformatics, 20, 3423-3430.

 Year 2003

•  Lee, K.E., Sha, N., Dougherty, E., Vannucci, M. and Mallick, B. (2003)  Gene Selection: A Bayesian variable selection approach. Bioinformatics, 19, 90-97.