Software to normalize
two-channel microarrays using the new efficient common array dye swap (eCADS)
method. eCADS removes intensity-dependent biases (like those seen
in so-called MA-plots) while accounting for the experimental design.
References
Dabney AR and Storey JD.
(2007) Normalization of two-channel microarrays accounting for
experimental design and intensity-dependent relationships. Genome
Biology, 8:R44.
Dabney AR and Storey JD.
(2007) A new approach to intensity-dependent normalization of
two-channel microarrays. Biostatistics, 8:128-139.
